The bhsdtr package: a general-purpose method of Bayesian inference for Signal Detection Theory models
This article is a preprint and has not been certified by peer review [What does this mean?].
Author(s) / Creator(s)
Paulewicz, Borysław
Blaut, Agata
Other kind(s) of contributor
SWPS University, Faculty in Katowice
Jagiellonian University
Abstract / Description
We describe a novel method of Bayesian inference for hierarchical or non-hierarchical equal variance normal Signal Detection Theory models with one or more criteria. The method is implemented as an open-source R package that uses the state-of-the-art Stan platform for sampling from posterior distributions. Our method can accommodate binary responses as well as additional ratings and an arbitrary number of nested or crossed random grouping factors. The SDT parameters can be regressed on additional predictors within the same model via intermediate unconstrained parameters, and the model can be extended by using automatically generated human-readable Stan code as a template. In the paper we explain how our method improves on other similar available methods, we give an overview of the package, demonstrate its use by providing a real-study data analysis walk-through, and show that the model successfully recovers known parameter values when fitted to simulated data. We also demonstrate that ignoring a hierarchical data structure may lead to severely biased estimates when fitting Signal Detection Theory models.
Preprint for: Paulewicz, B., Blaut, A. The bhsdtr package: a general-purpose method of Bayesian inference for signal detection theory models. Behav Res 52, 2122–2141 (2020). https://doi.org/10.3758/s13428-020-01370-y
Keyword(s)
Signal Detection Theory Bayesian Inference Hierarchical ModelsPersistent Identifier
Date of first publication
2020
Publisher
PsychArchives
Is version of
Citation
Paulewicz, B., & Blaut, A. (2020). The bhsdtr package: a general-purpose method of Bayesian inference for Signal Detection Theory models. PsychArchives. https://doi.org/10.23668/PSYCHARCHIVES.2725
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Paulewicz_Blaut_bhsdtr.pdfAdobe PDF - 416.66KBMD5: b78e0d65a2461b3f123b77867fc4958aDescription: Preprint
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Author(s) / Creator(s)Paulewicz, Borysław
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Author(s) / Creator(s)Blaut, Agata
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Other kind(s) of contributorSWPS University, Faculty in Katowiceen
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Other kind(s) of contributorJagiellonian Universityen
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PsychArchives acquisition timestamp2020-01-21T13:12:23Z
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Made available on2020-01-21T13:12:23Z
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Date of first publication2020
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Abstract / DescriptionWe describe a novel method of Bayesian inference for hierarchical or non-hierarchical equal variance normal Signal Detection Theory models with one or more criteria. The method is implemented as an open-source R package that uses the state-of-the-art Stan platform for sampling from posterior distributions. Our method can accommodate binary responses as well as additional ratings and an arbitrary number of nested or crossed random grouping factors. The SDT parameters can be regressed on additional predictors within the same model via intermediate unconstrained parameters, and the model can be extended by using automatically generated human-readable Stan code as a template. In the paper we explain how our method improves on other similar available methods, we give an overview of the package, demonstrate its use by providing a real-study data analysis walk-through, and show that the model successfully recovers known parameter values when fitted to simulated data. We also demonstrate that ignoring a hierarchical data structure may lead to severely biased estimates when fitting Signal Detection Theory models.en
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Abstract / DescriptionPreprint for: Paulewicz, B., Blaut, A. The bhsdtr package: a general-purpose method of Bayesian inference for signal detection theory models. Behav Res 52, 2122–2141 (2020). https://doi.org/10.3758/s13428-020-01370-yen
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Publication statusotheren
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Review statusnotRevieweden
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SponsorshipThis work was supported by the National Science Centre, Poland SONATA grant given to BP (2013/09/D/HS6/02792).en
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CitationPaulewicz, B., & Blaut, A. (2020). The bhsdtr package: a general-purpose method of Bayesian inference for Signal Detection Theory models. PsychArchives. https://doi.org/10.23668/PSYCHARCHIVES.2725en
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Persistent Identifierhttps://hdl.handle.net/20.500.12034/2339
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Persistent Identifierhttps://doi.org/10.23668/psycharchives.2725
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Language of contenteng
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PublisherPsychArchivesen
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Is version ofhttps://doi.org/10.3758/s13428-020-01370-y
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Requireshttps://github.com/boryspaulewicz/bhsdtr
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Is related tohttps://doi.org/10.3758/s13428-020-01370-y
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Keyword(s)Signal Detection Theoryen
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Keyword(s)Bayesian Inferenceen
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Keyword(s)Hierarchical Modelsen
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Dewey Decimal Classification number(s)150
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TitleThe bhsdtr package: a general-purpose method of Bayesian inference for Signal Detection Theory modelsen
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DRO typepreprinten